Performance Improvements with GPUs for Marine Biodiversity: A Cross-Tasman Collaboration
Submitted by lev_lafayette on Wed, 10/17/2018 - 22:40Identifying probable dispersal routes and for marine populations is a data and processing intensive task of which traditional high performance computing systems are suitable, even for single-threaded applications. Whilst processing dependencies between the datasets exist, a large level of independence between sets allows for use of job arrays to significantly improve processing time. Identification of bottle-necks within the code base suitable for GPU optimisation however had led to additional performance improvements which can be coupled with the existing benefits from job arrays.
